interface graph thumbnail
legend  pdf

structure nameCRYSTAL OF AMTR FROM CORYNEBACTERIUM GLUTAMICUM IN COMPLEX WITH DNA
(TetR family transcriptional regulator)
referencePalanca et al. 'Febs 283 1039 2016
sourceCorynebacterium glutamicum
experimentX-ray (resolution=3.00, R-factor=0.207)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory proteins, tetR family;
multimeric complexes5dy0_AB 5dy0_CD 6gy3_AB
reference complex6gy3_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureVRTHRQASYY

Estimated binding specificities ?

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# IC=7.625 IC/col=0.953 n_of_columns=8 specificity:   
A |   0  96   9  73   7  96   0  73
C |   0   0   7   7   7   0   0   9
G |   0   0   7   9  75   0   0   7
T |  96   0  73   7   7   0  96   7
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updated Mon Dec 18 12:32:49 2023