interface graph thumbnail
legend  pdf

structure nameCRYSTAL OF AMTR FROM CORYNEBACTERIUM GLUTAMICUM IN COMPLEX WITH DNA
(TetR family transcriptional regulator)
referencePalanca et al. 'Febs 283 1039 2016
sourceCorynebacterium glutamicum
experimentX-ray (resolution=3.00, R-factor=0.207)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory proteins, tetR family;
multimeric complexes5dy0_AB 5dy0_CD 6gy3_AB
reference complex6gy3_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureVRTHRQASYY

Estimated binding specificities ?

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# IC=7.412 IC/col=0.927 n_of_columns=8 specificity:   
A |   6  96   0   6   6  78   0  78
C |   6   0   0  78   6   6   0   6
G |   6   0   0   6   6   6   0   6
T |  78   0  96   6  78   6  96   6
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updated Fri Jan 9 03:08:06 2026