| structure name | CRYSTAL STRUCTURE OF NKX2-5 AND TBX5 BOUND TO THE NPPA PROMOTER REGION (HOMEOBOX PROTEIN NKX-2.5, T-BOX TRANSCRIPTION FACTOR TBX5) |
| reference | Stirnimann et al. 'Cell(Cambridge,Mass.)' 164 999 2016 |
| source | MUS MUSCULUS |
| experiment | X-ray (resolution=3.00, R-factor=0.196) |
| structural superfamily | p53-like transcription factors;Homeodomain-like; |
| sequence family | Tbox; Homeobox domain; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RIQNYKRTFF |
Estimated binding specificities ?
| contact |  |
A | 0 79 5 24 24 5 0 0 79 96 0 24 0 11 C | 96 7 67 24 24 0 0 0 7 0 0 24 0 12 G | 0 5 11 24 24 7 0 96 5 0 96 24 96 62 T | 0 5 13 24 24 84 96 0 5 0 0 24 0 11scan! |
Dendrogram of similar interfaces ?
matrix formatRAYA------IAQCNAYCKGRGTC--FGFT L +-----5flv_I +-----------1 --------------------RGTCSCFTFG +--------2 +-----2x6v_A ! ! --------------------RGTTATFTFG +-3 +-----------------1xbr_B ! ! RT--------VAQTNA-------------- L +-4 +--------------------------3lnq_A ! ! RT--------ITQCNAACRG---------- L +-5 +---------------------------6a8r_A ! ! RT--------VTKGNAKA------------ L +-6 +---------------------------2lkx_A ! ! RT--------NT--NAITRG---------- +-7 +---------------------------5zjt_B ! ! RT--STVCKGDCRG---------------- L +-8 +----------------------------1w0t_A ! ! RT------FTYAQTNAATRG---------- L --9 +----------------------------6ryd_F ! --------RTVAITNAMCRG---------- L +----------------------------1yrn_A |
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updated Tue Dec 19 10:24:47 2023