interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE OVEROXIDIZED ABFR BOUND TO DNA
(MarR family transcriptional regulator)
referenceYang et al. 'J. 139 1598 2017
sourceStaphylococcus epidermidis
experimentX-ray (resolution=3.00, R-factor=0.226)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyMarR family;
multimeric complexes5hlg_AC 5hlg_FH 5hlh_AC 5hlh_FH
reference complex5hlg_E
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSNTTR

Estimated binding specificities ?

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# IC=7.457 IC/col=0.829 n_of_columns=9 specificity:   
A |   7   0   0  88   1   7  24  88   9
C |   9  96   0   7   7   9  24   0   7
G |  73   0  96   0   0   7  24   1  73
T |   7   0   0   1  88  73  24   7   7
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updated Thu Sep 12 21:26:10 2024