| structure name | CRYSTAL STRUCTURE OF HUMAN NEIL1(242K) BOUND TO DUPLEX DNA CONTAINING THF (Endonuclease 8-like 1) |
| reference | Stovicek et al. Proc.Natl.Acad.Sci.USA 113 7792 2016 |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.41, R-factor=0.213) |
| structural superfamily | N-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain; |
| sequence family | Endonuclease VIIIlike 1, DNA bind; FormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; |
| redundant complexes | 5itr_B 5itt_B 5ity_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | MIRFHR |
Estimated binding specificities ?
| contact |  |
A | 45 9 31 0 0 0 C | 16 9 23 96 96 0 G | 16 69 21 0 0 0 T | 19 9 21 0 0 96scan! |
Dendrogram of similar interfaces ?
matrix format----MG--ITRCFGHGRG L +------5itu_A +------------2 ----MG--ITRCFG--RG ! +------6lwd_G --4 ----MG----RGFG--RG ! +---3twm_A ! +------------1 RT--MG----RCFC--RT L +--3 +---6tc9_A ! --QALGYA--------RG +----------------1k3x_A |
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updated Fri Sep 13 19:50:53 2024