interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF HUMAN NEIL1(P2G, E3Q, R242) BOUND TO DUPLEX DNA CONTAINING SPIROIMINODIHYDANTOIN (SP)
(Endonuclease 8-like 1)
referenceZhang et al. 'Nat 12 4108 2021
sourceHomo sapiens
experimentX-ray (resolution=2.41, R-factor=0.213)
structural superfamilyS13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain;N-terminal domain of MutM-like DNA repair proteins;
sequence familyEndonuclease VIIIlike 1, DNA bind; FormamidopyrimidineDNA glycosylase H2;
redundant complexes6lwa_G 6lwb_A 6lwc_A 6lwf_A 6lwg_D 6lwh_A 6lwi_A 6lwj_A 6lwk_G 6lwl_A 6lwm_D 6lwn_A 6lwo_G 6lwp_A 6lwq_A 6lwr_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  --MGITRCFGHGRG   L   +------------------------5itu_A    
                       ! 
  RTMT--RCFA--RT     --4                    +---6fl1_A    
                       !  +-----------------2 
  --MG--RCFC--RT   L   !  !                 ! +--6tc9_A    
                       +--3                 +-1 
  RA----RGFT--RA          !                   +--3gpu_A    
                          ! 
  --LGMTRCFC----   L      +---------------------3vk8_B    
                     

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updated Fri Dec 23 00:04:17 2022