5wjq_D : 3D-footprint complex

structure name	MOUSEZFP568-ZNF2-11 IN COMPLEX WITH DNA (Zinc finger protein 568)
reference	Patel et al. Cell 173 221 2018
source	Mus musculus
experiment	X-ray (resolution=2.79, R-factor=0.196)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	5v3j_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5wjq_D interface=45,47,48,51,73,74,75,101,103,107,128,129,131,132,135,157,160,163,185,187,188,191,213,216,241,243,244,247,269,272,275, gsekpykcqecgkafpsnaqlslhhrvhtdekcfeckecgkafmRpSHllRhqrihtgekphkckecgkafrYDTqlslhllthagarrfeckdcdkvysCaSqlaLhqmshtgekphkckecgkgfISdSHllRhqsvhtgetpykckecgkgfrRgsElaRhqrahsgdkpykckecgksftCtTElfRhqkvhtgdrphkckecgkafiRrsElthhershsgekpyeckecgktfgRgSElsRhqkihtgekpykcqqcgkafiRgsHltQhqriht
interface signature	RSHRYDTCSLISSHRRERCTERRERSERRHQ

Estimated binding specificities ?

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# IC=25.738 IC/col=1.072 n_of_columns=24

specificity:

A |   4   0   0   6   2   0   0   0   0   0  65   0  46   0   0   0  67  96  24  52  96   0   0   0
C |   2   0   0   4  88   0   0   0   0  96  17  96   0   0   0   0   6   0  24  26   0   0   0   0
G |   2  96  96  10   4  96   0  96  96   0   6   0  50  96  96   0  15   0  24   8   0  96  96  96
T |  88   0   0  76   2   0  96   0   0   0   8   0   0   0   0  96   8   0  24  10   0   0   0   0

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updated Sat Aug 2 09:46:04 2025