interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'RED14' DNA SEQUENCE
(HOMEOBOX PROTEIN ABDOMINAL-B)
referenceBaburajendran et al. 'Cell 24 2221 2018
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=2.44, R-factor=0.226)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes5zjq_AB 5zjr_AB 5zjs_AB
reference complex5zjt_E
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQNM

Estimated binding specificities ?

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# IC=6.301 IC/col=0.900 n_of_columns=7 specificity:   
A |   5  11  96   0  90  81  79
C |   5  62   0   0   5   5   5
G |   7   7   0   0   1   5   5
T |  79  16   0  96   0   5   7
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updated Sat Aug 2 10:13:51 2025