interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'BLUE14' DNA SEQUENCE
(HOMEOBOX PROTEIN ABDOMINAL-B)
referenceBaburajendran et al. 'Cell 24 2221 2018
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=2.90, R-factor=0.255)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes5zjq_AB 5zjr_AB 5zjs_AB
reference complex5zjt_E
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQNM

Estimated binding specificities ?

contactlogo
# IC=6.028 IC/col=0.861 n_of_columns=7 specificity:   
A |  18   0  54   0   6  96  78
C |   6  90  12   0   6   0   6
G |   0   0  12   0   6   0   6
T |  72   6  18  96  78   0   6
scan!

home
updated Sun Jun 28 14:45:44 2026