interface graph thumbnail
legend  pdf

structure nameYEAST RNA POLYMERASE III OPEN COMPLEX
experimentNMR
structural superfamilyHomeodomain-like;
sequence familyMyblike DNAbinding domain;
multimeric complexes6cnc_ABEOPRS
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  RA--YC----------------------                         +-----------------------------6f40_W    
                                                     +-1 
  ------RTSTVTMCKGDCRGTA------   L                 +-2 +-----------------------------1iv6_A    
                                                   ! ! 
  --RC--RT--------ITQCNAACRG--   L               +-3 +-----------------------------6a8r_A    
                                                 ! ! 
  ----RA----------IA--NA------                 +-4 +-----------------------------4xrs_G    
                                               ! ! 
  ------KA--VT--KGDCRGTA------   L           +-5 +-----------------------------1w0u_A    
                                             ! ! 
  ------RTRCET----SAQAKT------   L         +-6 +-----------------------------6qec_A    
                                           ! ! 
  ------RA------KGSAQA--------   L       +-7 +-----------------------------6j5b_C    
                                         ! ! 
  --------------RTVAIANAMCRG--   L     +-8 +-----------------------------1le8_A    
                                       ! ! 
  ------RT------QTVAQT------NA   L   +-9 +-----------------------------3a01_F    
                                     ! ! 
  ------RTSTVC--KGDCRG--------   L -10 +-----------------------------1w0t_A    
                                     !  
  ------RT--------VAQT------NA   L   +-----------------------------3lnq_A    
                                   

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updated Sat Jan 10 09:55:59 2026