interface graph thumbnail
legend  pdf

structure nameBACTERIOPHAGE N4 RNA POLYMERASE II ELONGATION COMPLEX 2
(RNAP1)
referenceMurakami et al. 'J. 293 13616 2018
sourceENTEROBACTERIA PHAGE N4
experimentX-ray (resolution=2.69, R-factor=0.193)
structural superfamilyDNA/RNA polymerases;
multimeric complexes6dt8_AB 6dta_AB
redundant complexes6dt8_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  LAHAKARA----------------------------------IAVARCYC                 +---------------------6dta_A    
                                                                     ! 
  --------------------------YGRG--------------------              +--7                    +4wcg_A    
                                                                  !  !     +--------------1 
  --------YA----KTPTPGYTRG--------------------------   L          !  +-----4              +4mtd_D    
                                                                  !        ! 
  ----------ETNTSCRGHCRT----------------QA----------   L          !        +---------------5d4s_B    
                                                              +---9 
  ----------------------RC--YG--------KT------------          !   !                  +------2acj_B    
                                                              !   !       +----------3 
  ------------------NTTA------------------RT--------   L      !   ! +-----6          +------5zux_A    
                                                              !   ! !     ! 
  --------------------NASTRGHTNTSTLT----------------   L   +-10   +-8     +-----------------7fj2_B    
                                                           !  !     ! 
  ----------------RCET--SA--QAKT--------------------   L   !  !     +-----------------------6qec_A    
                                                           !  !  
  ----------------------IT--QCNA--ACRG--------------   L   !  !                           +6a8r_A    
                                                         -11  !           +---------------2 
  ----------------------VA--QTNA--------------------   L   !  +-----------5               +3lnq_A    
                                                           !              ! 
  --------------------RTVA--ITNA--MCRG--------------   L   !              +----------------1yrn_A    
                                                           !  
  ----------------STVCKGDC--RG----------------------   L   +----------------------------1w0t_A    
                                                         

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updated Fri Sep 13 21:33:10 2024