| structure name | CRYSTAL STRUCTURE OF THE B/Z JUNCTION CONTAINING DNA BOUND TO Z-DNA BINDING PROTEINS (Double-stranded RNA-specific adenosine deaminase) |
| reference | Lowenhaupt et al. Nature 437 1183 2005 |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.60, R-factor=0.243) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Adenosine deaminase zalpha domain; |
| multimeric complexes | 2acj_BCD 3irq_AD 3irr_AB 3irr_CD 5zu1_BC 5zuo_BCD 5zup_BCD |
| redundant complexes | 3irq_D 3irr_C 5zu1_B 5zuo_B 5zup_D |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format------LT------RTSGTG--QTRG-------------------- L +------2xro_E +---------------3 ----------------TTHT----KG--------------RC---- L +--6 +------7b0c_A ! ! RGRTKG----------------------------------YG---- L +--8 +----------------------6lui_A ! ! --------------RC------RC---------------------- ! +-------------------------6wfq_C ! ------------------------------YG-------------- ! +2heo_D +-9 +--------------1 ----------------NT----TA------------------RT-- L ! ! +-----4 +5zux_A ! ! ! ! --------SGQG--YCNC---------------------------- ! ! +-5 +--------------2ve9_C +-10 ! ! ! ------------DCLT--AG--TTRG------RG----------RA L ! ! +-----7 +--------------------5h3r_A ! ! ! ----------------NTVC--ECSTYT--STYC------RA---- L +-11 ! +----------------------5ed4_A ! ! ! --------TC--STKTPTTT--FT--------------------RT ! ! +-----------------------------4ass_H +-12 ! --------------RCTT----TTHT--LA---------------- L ! ! +-----------------------------7e1b_B +-13 ! --------------------------------------------RT ! ! +-----------------------------3gfi_A ! ! ------------------QTNAST--RGHTNT--STLA-------- L +-14 +-----------------------------2hdc_A ! ! ----------------------NAST--RGHT----ST-------- L ! ! +3g73_A +-15 +----------------------------2 ----------------------NAST--RGHTNT--STLT------ L ! ! +7fj2_B +-16 ! ------------STRGECTA--NGKG-------------------- L ! ! +-----------------------------3mzh_A -17 ! ------------TT--RGRT--------------------SG---- L ! +-----------------------------2v1u_A ! ----------------DCKT----RG----RGYA------------ L +-----------------------------1dux_F |
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updated Thu Dec 22 18:06:20 2022