| structure name | CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE SIGMA4 OF SIGMAS FUSING WITH THE RNA POLYMERASE BETA-FLAP-TIP-HELIX IN COMPLEX WITH -35 ELEMENT DNA (RNA POLYMERASE SIGMA FACTOR RPOS,RNA POLYMERASE BETA-FLAP-...) |
| reference | Chien et al. Proteins 88 69 2020 |
| source | ESCHERICHIA COLI, KLEBSIELLA PNEUMONIAE |
| experiment | X-ray (resolution=3.75, R-factor=0.226) |
| structural superfamily | Sigma3 and sigma4 domains of RNA polymerase sigma factors; |
| sequence family | Sigma70, region 4; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | LTRERRQ |
Estimated binding specificities ?
| contact |  |
A | 0 0 0 38 96 0 C | 0 0 77 20 0 0 G | 96 0 0 19 0 96 T | 0 96 19 19 0 0scan! |
Dendrogram of similar interfaces ?
matrix format----LTTTRGECRCRTQC-------- L +-----------------------------4xln_F ! ----LG------TA--KGTAHTRG-- L ! +6jhe_A +-4 +--------------1 PCFCYG------TG--MGSG--RGQC ! ! +----2 +5zx2_F ! ! ! ! ------TTRG--AT--STQC--RG-- L --5 +--------3 +---------------2w7n_B ! ! ----------RTTC--DTSCSGKG-- L ! +--------------------5x5l_H ! ----YA------TG--RTSGFTRC-- L +-----------------------------6jbq_F |
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updated Tue Dec 19 13:06:56 2023