6pwe_G : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4; Histonelike transcription factor CBF/;
multimeric complexes	2nqb_ABCDEFGH 2pyo_ABCDEFGH 4qlc_ABCDEFGHU 4x23_ABCDEFG 4x23_KLMNOPQ 5wcu_ABCDEFGHU 5wcu_KLMNOPQRV 6dzt_ABCDEFGH 6pwe_ABCDEFGH 6pwf_ABCDEFGHK 8pp6_ABCDEFGH 8pp7_ABCDEFGH 8ux1_ABCDEFGH
redundant complexes	6dzt_C 6pwf_C 7xyf_E 2nqb 2pyo 4qlc 4x23 5wcu 7xyg 8pp6 8pp7 8ux1
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6pwe_G interface=3,28, ksRsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllp

  
  ------RG--                                   +8txv_G    
                               +---------------1 
  ------RG--              +----6               +8upf_G    
                          !    ! 
  ------RC--            +-8    +---------------7yqk_C    
                        ! ! 
  --HGRTRG--            ! +--------------------8rbx_V    
                   +----9 
  ------RT--       !    !                   +8u14_G    
                   !    !           +-------3 
  ------RARA       !    +-----------4       +6a5l_g    
                   !                ! 
  ------RA--       !                +--------7e9c_F    
                 -11  
  ------RA--       !                         +7xsx_a    
                   !          +--------------2 
  ------RC--       !     +----5              +7ux9_E    
                   !     !    ! 
  ------RT--       !  +--7    +--------------6px1_A    
                   !  !  ! 
  LA----RG--       +-10  +-------------------7unc_a    
                      !  
  LC--------          +----------------------8bvw_e

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updated Sat Jan 10 11:15:43 2026