6pwe_G : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4; Histonelike transcription factor CBF/;
multimeric complexes	2nqb_ABCDEFGH 2pyo_ABCDEFGH 4qlc_ABCDEFGHU 4x23_ABCDEFG 4x23_KLMNOPQ 5wcu_ABCDEFGHU 5wcu_KLMNOPQRV 6dzt_ABCDEFGH 6pwe_ABCDEFGH 6pwf_ABCDEFGHK 8pp6_ABCDEFGH 8pp7_ABCDEFGH 8ux1_ABCDEFGH
redundant complexes	6dzt_C 6pwf_C 2nqb 2pyo 4qlc 4x23 5wcu 7xyf 7xyg 8pp6 8pp7 8ux1
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6pwe_G interface=3,28, ksRsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllp

  
  --RG----          +--------------------------8ox0_C    
                    !  
  --RT----          !                            +8u14_G    
                    !                +-----------1 
  --RA----          !           +----7           +1zla_C    
                    !           !    ! 
  LCRT----          !     +-----8    +-----------8hr1_E    
                    !     !     ! 
  --RG----          !     !     !                +8txv_G    
                 +-12     !     +----------------4 
  --RA--RA       !  !     !                      +6a5l_g    
                 !  !     !  
  --RC----       !  !  +-10                  +---6qld_f    
                 !  !  !  !             +----5 
  ----RA--       !  !  !  !             !    +---6g0l_D    
                 !  !  !  !   +---------6 
  --RA----       !  !  !  !   !         !          +7xsx_a    
               -13  !  !  !   !         !        +-2 
  LC------       !  +-11  +---9         +--------3 +8bvw_e    
                 !     !      !                  ! 
  --RT----       !     !      !                  +8grq_A    
                 !     !      ! 
  LARG----       !     !      +------------------7unc_a    
                 !     !  
  --RG----       !     +-----------------------8jla_C    
                 !  
  --RG----       +-----------------------------5x0y_G

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updated Sun Aug 3 12:40:32 2025