6pwe_H : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	2nqb_ABCDEFGH 2pyo_ABCDEFGH 4qlc_ABCDEFGHU 6dzt_ABCDEFGH 6pwe_ABCDEFGH 6pwf_ABCDEFGHK 8pp6_ABCDEFGH 8pp7_ABCDEFGH 8ux1_ABCDEFGH
redundant complexes	4qlc_D 8pp6_D 8pp7_H 8ux1_H 2nqb 2pyo 6dzt 6pwf 7xyg
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6pwe_H interface=3, rkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss

  
  ----RA--       +---------------------------6g0l_D    
                 !  
  RT------       !                      +----9fgq_D    
                 !         +------------5 
  --RG----       !     +---8            +----5x0y_G    
               -13     !   ! 
  --RG----       !  +-10   +-----------------8ox0_C    
                 !  !  !  
  --RG----       !  !  +---------------------8jla_C    
                 !  !  
  --RA----       +-12            +--------------1zla_C    
                    !  +---------7 
  --RG----          !  !         !              +8txv_G    
                    !  !         +--------------2 
  --RA--RA          !  !                        +6a5l_g    
                    +-11  
  --RT----             !     +------------------8u14_G    
                       !     ! 
  --RA----             !     !                  +7xsx_a    
                       +-----9               +--1 
  --RT----                   !       +-------4  +8grq_A    
                             !       !       ! 
  --RC----                   +-------6       +--6qld_f    
                                     ! 
  --RG----                           !          +7unc_a    
                                     +----------3 
  --RT----                                      +8hr1_E

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updated Sun Aug 3 12:41:46 2025