6pwe_H : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	2nqb_ABCDEFGH 2pyo_ABCDEFGH 4qlc_ABCDEFGHU 6dzt_ABCDEFGH 6pwe_ABCDEFGH 6pwf_ABCDEFGHK 8pp6_ABCDEFGH 8pp7_ABCDEFGH 8ux1_ABCDEFGH
redundant complexes	4qlc_D 8pp6_D 8pp7_H 8ux1_H 2nqb 2pyo 6dzt 6pwf 7xyg
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6pwe_H interface=3, rkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss

  
  RT--           +----------------------9fgq_D    
                 ! 
  --RA         +-3                      +7xsx_a    
               ! !                   +--1 
  --RG         ! +-------------------2  +7unc_a    
             +-4                     ! 
  --RC       ! !                     +--6qld_f    
           --5 ! 
  --RG       ! +------------------------8txv_G    
             ! 
  --RT       +-------------------------8u14_G

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updated Fri Sep 13 23:00:18 2024