6pwe_H : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	2nqb_ABCDEFGH 2pyo_ABCDEFGH 4qlc_ABCDEFGHU 6dzt_ABCDEFGH 6pwe_ABCDEFGH 6pwf_ABCDEFGHK
redundant complexes	4qlc_D 2nqb 2pyo 6dzt 6pwf
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6pwe_H interface=3, rkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss

  
  RG----       +-----------------------7k6p_D    
               ! 
  ----RA       !                        +7xsx_a    
               !               +--------1 
  ----RG       !               !        +7unc_a    
               !        +------4 
  ----RC     --8        !      !     +--6qld_f    
               !        !      +-----3 
  ----RA   L   !   +----5            +--8he5_a    
               !   !    ! 
  --LTRC       !   !    !               +3kwq_E    
               ! +-6    +---------------2 
  ----RT       ! ! !                    +8siy_G    
               +-7 ! 
  ----RT         ! +--------------------8cww_A    
                 ! 
  ----RG         +---------------------7uv9_E

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updated Tue Dec 19 14:09:47 2023