6pwe_H : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	2nqb_ABCDEFGH 2pyo_ABCDEFGH 4qlc_ABCDEFGHU 4x23_ABCDEFG 4x23_KLMNOPQ 5wcu_ABCDEFGHU 5wcu_KLMNOPQRV 6dzt_ABCDEFGH 6pwe_ABCDEFGH 6pwf_ABCDEFGHK 8pp6_ABCDEFGH 8pp7_ABCDEFGH 8ux1_ABCDEFGH
redundant complexes	4qlc_D 8pp6_D 8pp7_H 8ux1_H 2nqb 2pyo 4x23 5wcu 6dzt 6pwf 7xyf 7xyg
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6pwe_H interface=3, rkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss

  
  RG------          +-----------------------------7ccr_H    
                 +-10  
  ----RC--       !  +-----------------------------7yqk_C    
                 !  
  ----RG--       !                             +8txv_G    
                 !              +--------------1 
  ----RG--       !              !              +8upf_G    
                 !            +-6 
  ----RT--     -11            ! !             +8u14_G    
                 !            ! +-------------4 
  ----RARA       !       +----7               ! +6a5l_g    
                 !       !    !               +-3 
  --HGRG--       !       !    !                 +8rbx_V    
                 !       !    ! 
  ----RA--       !       !    +----------------7e9c_F    
                 +-------9 
  ----RA--               !                     +7xsx_a    
                         !      +--------------2 
  ----RC--               ! +----5              +7ux9_E    
                         ! !    ! 
  ----RT--               +-8    +--------------6px1_A    
                           ! 
  ----RG--                 +-------------------7unc_a

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updated Sat Jan 10 11:17:10 2026