interface graph thumbnail
legend  pdf

structure nameDTXR-LIKE IRON-DEPENDENT REGULATOR IDER COMPLEXED WITH COBALT AND ITS CONSENSUS DNA-BINDING SEQUENCE
referenceMarcos-Torres et al.
experimentX-ray (resolution=2.12, R-factor=0.231)
structural superfamilyIron-dependent repressor protein, dimerization domain;"Winged helix" DNA-binding domain;
sequence familyIron dependent repressor, metal bindin; Iron dependent repressor, Nterminal D;
multimeric complexes7b1y_ABCD 7b20_ABCD 7b23_ABCD 7b24_ABCD 7b25_ABCD
reference complex7b24_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSPTSQR

Estimated binding specificities ?

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# IC=5.300 IC/col=0.883 n_of_columns=6 specificity:   
A |   9   9  96   9   0   0
C |  11   9   0   9   0   0
G |   9  11   0  67  96   0
T |  67  67   0  11   0  96
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updated Fri Sep 13 03:40:00 2024