interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (23 BP)
referenceFeng et al. Iscience 24 102951 2021
experimentX-ray (resolution=2.40, R-factor=0.197)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyHSFtype DNAbinding;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSVRQNR

Estimated binding specificities ?

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# IC=6.373 IC/col=0.910 n_of_columns=7 specificity:   
A |  10  96   0  96  52  19  96
C |   0   0   0   0  17  17   0
G |   8   0  96   0  10  17   0
T |  78   0   0   0  17  43   0
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updated Tue Dec 17 08:59:30 2024