interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (23 BP)
referenceFeng et al. Iscience 24 102951 2021
experimentX-ray (resolution=2.40, R-factor=0.197)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyHSFtype DNAbinding;
multimeric complexes7dcj_AB 7dcs_ABC 7dcs_DEF 7dct_ABC 7dct_DEF
reference complex5hdn_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSVRQNR

Estimated binding specificities ?

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# IC=6.271 IC/col=0.896 n_of_columns=7 specificity:   
A |   0  48  16   0   0   0  72
C |   0  16  16   0  96   0   8
G |   0  16   8   0   0   0   8
T |  96  16  56  96   0  96   8
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updated Fri Sep 13 03:50:59 2024