interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (24 BP)
referenceFeng et al. Iscience 24 102951 2021
experimentX-ray (resolution=2.36, R-factor=0.188)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyHSFtype DNAbinding;
multimeric complexes7dcj_AB 7dcs_ABC 7dcs_DEF 7dct_ABC 7dct_DEF
reference complex5hdn_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSVRQNR

Estimated binding specificities ?

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# IC=6.292 IC/col=0.899 n_of_columns=7 specificity:   
A |   7  73   7   0   0   0  75
C |   9   7   9   0  96   0   7
G |   7   7   7   0   0   0   7
T |  73   9  73  96   0  96   7
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updated Fri Sep 13 03:51:06 2024