3D-footprint cannot reliably estimate the specificity of 'beta and beta-prime subunits of DNA dependent RNA-polymerases', as these often contain single-stranded DNA molecules which accumulate many base contacts which distort the calculations.

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updated Wed Dec 18 10:04:22 2024

structure name	YEAST RNA POLYMERASE II TRANSCRIPTION PRE-INITIATION COMPLEX WITH INITIAL TRANSCRIPTION BUBBLE
experiment	NMR
structural superfamily	beta and beta-prime subunits of DNA dependent RNA-polymerase;
sequence family	RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 7; RNA polymerase Rpb2, domain 4; RNA polymerase Rpb2, domain 5; RNA polymerase Rpb2, domain 3;
multimeric complexes	6gym_7MOQRW 6gym_BU 7o4i_7ABMOQRUWX 7o4j_7MOQRUWX 7o72_7AMOQRUWX 7o73_7ABMOQRUWX 7o75_7ABEMOQRUX 7uio_AB
redundant complexes	6gym 7o4j 7o72 7o73 7o75 7uio 8cen 8ceo
links to other resources	NAKB PDIdb DNAproDB