7tdw_A : 3D-footprint complex

structure name	STRUCTURE OF FOXP3-DNA COMPLEX
reference	Leng et al. Immunity 55 1354 2022
experiment	X-ray (resolution=4.00, R-factor=0.336)
structural superfamily	"Winged helix" DNA-binding domain;
sequence family	Fork head domain;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7tdw_A interface=62,65,66,69, peffhnmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSlhkcfvrvesekgavwtvdef
interface signature	NRHS

Estimated binding specificities ?

contact

# IC=4.691 IC/col=0.782 n_of_columns=6

specificity:

A |   0  16   5   0  19  83
C |   0   6   4   0  12   5
G |   0  54   4   0  20   4
T |  96  20  83  96  45   4

scan!

Dendrogram of similar interfaces ?

matrix format

  
  KGQG----------------------                                       +-8h7a_A    
                                       +---------------------------1 
  --------TCTG--YTRT--------         +-2                           +-7vpz_N    
                                     ! ! 
  ----FGTTPTRTAT----LT------   L   +-3 +-----------------------------4hqe_A    
                                   ! ! 
  ----DTRTRGTT----KT--------   L --4 +-----------------------------2o8k_A    
                                   ! 
  ------------KT----RGSTRGYC   L   +-----------------------------4uno_A

home
updated Tue Dec 19 20:45:16 2023