| structure name | CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF FOXO4 BOUND TO DNA (Forkhead box protein O4) |
| reference | Obsilova et al. 'Acta 66 1351 2010 |
| source | Homo sapiens |
| experiment | X-ray (resolution=1.87, R-factor=0.195) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Fork head domain; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | SNSRHS |
Estimated binding specificities ?
| readout + contact |  |
A | 9 7 7 0 0 96 7 C | 7 7 7 0 7 0 9 G | 7 81 9 0 1 0 73 T | 73 1 73 96 88 0 7scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: FOXO4 | ||
| TTGTTTAC | PubMed | 3l2c_A(1.35e-11) |
Dendrogram of similar interfaces ?
matrix format------ST------NAST--RTHT--STLT---- L +4lg0_A +------------------------1 --------------NAST--RGHT--STFT---- L ! +1vtn_C ! ------ST------NAST--RTHT--ST------ L ! +--3l2c_A ! +------2 --------------NAST--RGHT--STLT---- L --7 +-----3 +--7cby_C ! ! ! ------------RTSTHG--------------RA L ! +---4 +---------3zpl_B ! ! ! RT--LA--HGTTETYTRG---------------- L ! +--5 +---------------1f4k_B ! ! ! --TT------KATTQTTG----LTRT----KA-- L +-6 +-------------------2p7c_B ! ----------------RGNTRGSTAT--RA---- L +----------------------2o6g_G |
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updated Sat Jan 10 06:12:58 2026