interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF NF-KB P52 HOMODIMER BOUND TO A/T-CENTRIC P-SELECTIN KB DNA FRAGMENT
(Nuclear factor NF-kappa-B p52 subunit)
referenceMeshcheryakov et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=3.10, R-factor=?)
structural superfamilyp53-like transcription factors;E set domains;
sequence familyRel homology domain RHD; IPT/TIG domain;
multimeric complexes7cli_AB 7vup_AB 7vuq_AB 7w7l_AB
reference complex7cli_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRYCESH

Estimated binding specificities ?

contactlogo
# IC=4.434 IC/col=0.887 n_of_columns=5 specificity:   
A |   0   0   0  13  13
C |   0   0   0  16  16
G |  96  96  96  54  13
T |   0   0   0  13  54
scan!

home
updated Sat Aug 2 21:13:15 2025