interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF NF-KB P52 HOMODIMER BOUND TO 13-MER A/T-CENTRIC P- SELECTIN KB DNA FRAGMENT
(Nuclear factor NF-kappa-B p52 subunit)
referenceMeshcheryakov et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=3.00, R-factor=?)
structural superfamilyp53-like transcription factors;E set domains;
sequence familyRel homology domain RHD; IPT/TIG domain;
multimeric complexes7cli_AB 7vup_AB 7vuq_AB 7w7l_AB
reference complex7cli_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRYEHK

Estimated binding specificities ?

readout + contactlogo
# IC=4.382 IC/col=1.096 n_of_columns=4 specificity:   
A |   3   1   0   4
C |  90  91  96  85
G |   1   1   0   4
T |   2   3   0   3
scan!

home
updated Tue Dec 19 00:43:55 2023