interface graph thumbnail
legend  pdf

structure nameCRYO-EM STRUCTURE OF HOLO-PDXR FROM BACILLUS CLAUSII BOUND TO ITS TARGET DNA IN THE CLOSED CONFORMATION, C2 SYMMETRY.
experimentNMR
structural superfamilyPLP-dependent transferases;"Winged helix" DNA-binding domain;
sequence familyBacterial regulatory proteins, gntR family;
multimeric complexes7zla_AB 7zn5_AB 7zpa_AB 7zth_AB
reference complex7zla_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRSQNER

Estimated binding specificities ?

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# IC=4.123 IC/col=0.589 n_of_columns=7 specificity:   
A |  59  11  24  24   0   9   0
C |  19   9  24  24   0  11   0
G |   9   0  24  24  96  67   0
T |   9  76  24  24   0   9  96
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updated Fri Sep 13 09:37:04 2024