interface graph thumbnail
legend  pdf

structure nameCRYO-EM STRUCTURE OF HOLO-PDXR FROM BACILLUS CLAUSII BOUND TO ITS TARGET DNA IN THE CLOSED CONFORMATION, C2 SYMMETRY.
experimentNMR
structural superfamilyPLP-dependent transferases;"Winged helix" DNA-binding domain;
sequence familyBacterial regulatory proteins, gntR family;
multimeric complexes7zla_AB 7zn5_AB 7zpa_AB 7zth_AB
reference complex7zla_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRSQNER

Estimated binding specificities ?

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# IC=4.007 IC/col=0.572 n_of_columns=7 specificity:   
A |  96   9   0  24  24  67   9
C |   0  67  96  24  24   9   9
G |   0   9   0  24  24   9   9
T |   0  11   0  24  24  11  69
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updated Tue Dec 17 15:18:10 2024