interface graph thumbnail
legend  pdf

structure nameCRYO-EM STRUCTURE OF HOLO-PDXR FROM BACILLUS CLAUSII BOUND TO ITS TARGET DNA IN THE CLOSED CONFORMATION, C1 SYMMETRY
experimentNMR
structural superfamilyPLP-dependent transferases;"Winged helix" DNA-binding domain;
sequence familyBacterial regulatory proteins, gntR family;
multimeric complexes7zla_AB 7zn5_AB 7zpa_AB 7zth_AB
reference complex7zla_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRSQNR

Estimated binding specificities ?

contactlogo
# IC=4.960 IC/col=0.620 n_of_columns=8 specificity:   
A |  73   0   0   7  73  24  24  73
C |   7  96   0   7   9  24  24   9
G |   7   0   0  75   7  24  24   7
T |   9   0  96   7   7  24  24   7
scan!

home
updated Tue Dec 17 15:18:55 2024