8df7_A : 3D-footprint complex

structure name	STRUCTURE OF M. KANDLERI TOPOISOMERASE V IN COMPLEX WITH DNA. 38 BASE PAIR SYMMETRIC DNA COMPLEX (Topoisomerase V)
reference	Mondragon et al. Elife 11 ? 2022
source	Methanopyrus kandleri
experiment	X-ray (resolution=3.52, R-factor=0.231)
structural superfamily	Topoisomerase V catalytic domain-like;RuvA domain 2-like;
sequence family	Helixhairpinhelix motif;
multimeric complexes	8df7_AB 8df8_AB 8dfb_AB
reference complex	8df8_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8df7_A interface=132,199,286,287, lvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfilltgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldideedvpaievravKrnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpidekeerileilrenpwtphDeiarrlglsvsevegekdpessgiyslwsrvvvnieydertakrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimrRYleqrivecalklqdrygiredvalclarafdgsismiattpyrtlkdvcpdltleeaksvnrtlatlidehglspdaadeliehfesiagilatdleeiermyeegrlseeayraaveiqlaeltkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisirgidreraerllkkyggyskvreagveelredgltdaqirelkglktlesivgdlekadelkrkygsasavrrlpveelrelgfsddeiaeikgipkklreafdletaaelyerygslkeigrrlsyddllelgatpkaaaeikgpefkfllniegvgpklaerileavdydlerlaslnpeelaekveglgeelaervvyaarervesrrksgrqerseeewkewlerkvgegrarrlieyfgsagevgklvenaevskllevpgigdeavarlvpgyktlrdagltpaeaervlkrygsvskvqegatpdelrelglgdakiarilglrslvnarldvdtayelarrygsvsavraapvaelrelglsdraiariag
interface signature	KDRY

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# IC=4.250 IC/col=0.607 n_of_columns=7

A |   0   0   0  60  24  24  60
C |   0  12  96  12  24  24  12
G |   0  84   0  12  24  24  12
T |  96   0   0  12  24  24  12

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updated Tue Dec 17 16:05:22 2024