8df8_A : 3D-footprint complex

structure name	STRUCTURE OF M. KANDLERI TOPOISOMERASE V IN COMPLEX WITH DNA. 40 BASE PAIR SYMMETRIC DNA COMPLEX (Topoisomerase V)
reference	Mondragon et al. Elife 11 ? 2022
source	Methanopyrus kandleri
experiment	X-ray (resolution=2.92, R-factor=0.259)
structural superfamily	Topoisomerase V catalytic domain-like;RuvA domain 2-like;
sequence family	Helixhairpinhelix motif;
multimeric complexes	8df7_AB 8df8_AB 8dfb_AB
redundant complexes	8df7_A 8df9_A 8dfb_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8df8_A interface=286,287,751,752, lvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfilltgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldideedvpaievravkrnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpidekeerileilrenpwtphdeiarrlglsvsevegekdpessgiyslwsrvvvnieydertakrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimrRYleqrivecalklqdrygiredvalclarafdgsismiattpyrtlkdvcpdltleeaksvnrtlatlidehglspdaadeliehfesiagilatdleeiermyeegrlseeayraaveiqlaeltkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisirgidreraerllkkyggyskvreagveelredgltdaqirelkglktlesivgdlekadelkrkygsasavrrlpveelrelgfsddeiaeikgipkklreafdletaaelyerygslkeigrrlsyddllelgatpkaaaeikgpefkfllniegvgpklaerileavdydlerlaslnpeelaekveglgeelaervvyaarervesrrksgrqerseeewkewlerkvgegrarrlieyfgsagevgklvenaevskllevpgigdeavarlvpgyKTlrdagltpaeaervlkrygsvskvqegatpdelrelglgdakiarilglrslvnarldvdtayelarrygsvsavraapvaelrelglsdraiariag
interface signature	RYKT

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# IC=3.101 IC/col=0.775 n_of_columns=4

A |  13  16   0  96
C |  13  13  96   0
G |  16  54   0   0
T |  54  13   0   0

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updated Wed Dec 18 16:52:19 2024