8iaz_A : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF THE ISFBA1 TNPB-RERNA-DSDNA COMPLEX
experiment	NMR
structural superfamily	BAR/IMD domain-like;
sequence family	Probable transposase; Putative transposase DNAbinding domai;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8iaz_A interface=51,76,77,80,114,116,118,119, llksfkteinpseeqkvkihktigtcrfiynfylahnkelydkgekfmsgKsfsvwlnneylpqnpdklwikevsSKsvKhsiengciaftrffkhqsafpnlkkkgksdvkmYfVkNNpkdcrcerhrinipslgwvrikekgyipttkdgyviksgtvsmkadryyvsvlveisnnkiannsnagigidlglkdfaivsngktykninksarlkkhekqlireqrslsrkyenlkkgestqkaniqkqrlkvqklhhrmdnirtdyinktiaeivktkpsyitiedlnvkgmmknrhlskavasqkfyefrtklqakcnengielrvvdrwypssktchccgavkkdlklsdrifkcscgyvedrafnaalnlrdaityeva
interface signature	KSKKYVNN

Estimated binding specificities ?

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# IC=5.766 IC/col=0.961 n_of_columns=6

specificity:

A |   0  96  13  16  96   0
C |   0   0  16  13   0   0
G |   0   0  54  54   0  96
T |  96   0  13  13   0   0

scan!

Dendrogram of similar interfaces ?

matrix format

  
  LGSGKGFASTKCSCSGKTKG----TARTFGFA--FGYCVCNCNALG----------------YA----   L               +--------------8iaz_A    
                                                                                   +-----1 
  MC------------WT--NTDGKG----RA--PGTA--------TCDGTCRCAG--QGIT----ACLT   L   +-----2     +--------------8hhl_A    
                                                                             !     ! 
  --------------------------------------------NA--------------KG------   L --3     +--------------------8dc2_A    
                                                                             ! 
  ------------------------------------------------------QC------------   L   +--------------------------6ny3_Y

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updated Tue Jun 30 16:49:16 2026