8kgq_A : 3D-footprint complex

structure name	STRUCTURE OF AFRICAN SWINE FEVER VIRUS TOPOISOMERASE II IN COMPLEX WITH DSDNA
experiment	NMR
structural superfamily	Type II DNA topoisomerase;ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase;Ribosomal protein S5 domain 2-like;
sequence family	DNA gyrase B; DNA gyrase/topoisomerase IV, subunit A 2246;
reference complex	8j9v_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8kgq_A interface=471,545,704,754,797,849,850,855, afeisdfkehakkksmwagalnkvtisglmgvftededlmalpihrdhcpallkifdeiivnatdherachnktkkvtyikisfdkgvfscendgpgipiakheqasliakrdvyvpevaschflagtninkakdcikggtngvglklamvhsqwailttadgaqkyvqhinqrldiiepptitpsremftrielmpvyqelgyaeplseteqadlsawiylracqcaayvgkgttiyyndkpcrtgsvmalakmytllsapnstihtatikadakpyslhplqvaavvspkfkkfehvsvingvncvkgehvtflkktinemvvkkfqqtikdknrkttlrdscsnifivivgsipgiewtgqrkdelsiaenvfkthysipssfltsmtksivdillqsiskkdnhkqvdvdkytrarnaggkraqdcmllaaegdsalsllrtgltlgksnpsgpsfdfcgmislggVimnackkvtnittdsgetimvrneqltnnkvlqgivqvlgldfnchyktqeeraklrygcivacvdqdldgcgKilglllayfhlfwpqliihgfvkrlltplirvyekgktmpvefyyeqefdawakkqtslanhtvkyykglaahdthevksmfkhfdnmvytftlddsakelfhiyfggeselrkrelctgvvpltetqtqsihsvrripcslhlqvdtkaykldaierQipnfldgmtrarrkilaggvkcfasnnrerkvfqfggyvadhmfyhhgdMslntsiikaaqyypgsshlypvfigigsfgsrhlggkdagspRyisvqlasefiktmfpaedswllpyvfedgqraepeyyvpvlplaimeygaNPsegwKyttwarqledilalvrayvdkdnpkhellhyaikhkitilplrpsnynfkghlkrfgqyyysygtyviseqrniititelplrvptvayiesikkssnrmtfieeiidysssetieilvklkpnslnriveefketeeqdsienflrlrnclhshlnfvkpkggiiefntyyeilyawlpyrrelyqkrlmrehavlklriimetaivryinesaelnlshyedekeasrilsehgfpplnhtliispefasieelnqkalqgcytyilslqarelliaaktrrvekikkmqarldkveqllqespfpgasvwleeidavekaiikgrntqwkfh
interface signature	VKQMRNPK

Estimated binding specificities ?

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# IC=6.655 IC/col=0.951 n_of_columns=7

specificity:

A |   2  54  17  96   0  96   0
C |   8   8  63   0  96   0   0
G |   8  17   8   0   0   0   0
T |  78  17   8   0   0   0  96

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updated Fri Sep 13 12:26:49 2024