Interface of input file ?

interface graph
legend  pdf

footprint
legend

structure nameCLOCK-BMAL1 BOUND TO THE NATIVE POR NUCLEOSOME
experimentNMR
structural superfamilyHLH, helix-loop-helix DNA-binding domain;
sequence familyHelixloophelix DNAbinding domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  HG--ITEC--RCRG   L       +-----------------------------5nj8_D    
                         +-1 
  NTNGRTECRGRC--   L   +-2 +-----------------------------6od3_F    
                       ! ! 
  HGNT--ET----RG   L --3 +-----------------------------6g1l_A    
                       ! 
  --NT--ET--RCMT       +-----------------------------2ql2_D

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updated Wed Dec 20 03:50:29 2023