interface graph thumbnail
legend  pdf

structure nameMANGANESE-DEPENDENT TRANSCRIPTIONAL REPRESSOR DR2539 COMPLEXED WITH MANGANESE AND BOUND TO DR1709 PROMOTOR
(Iron dependent repressor, putative)
referenceDe Sanctis et al. 'Febs ? ? 2024
sourceDeinococcus radiodurans
experimentX-ray (resolution=2.20, R-factor=0.185)
structural superfamilyIron-dependent repressor protein, dimerization domain;"Winged helix" DNA-binding domain;
sequence familyIron dependent repressor, metal bindin; Iron dependent repressor, Nterminal D; MarR family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  --------RGSTRTSTHG--------RA----   L                   +---------------3zpl_B    
                                                   +-----2 
  ------DCLT--AGTTRG--RG----RA----   L             !     !               +5h3r_A    
                                           +-------3     +---------------1 
  ----------------RCYG----KT------         !       !                     +2acj_B    
                                         +-4       ! 
  --TT------KATTQTTGLTRTKA----FTYT   L   ! !       +---------------------2p7c_B    
                                       --5 ! 
  RT--LANTHGTTETYTRG--------------   L   ! +-----------------------------1f4k_B    
                                         ! 
  ------------------YG------------       +-----------------------------3eyi_B    
                                       

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updated Sun Jan 11 01:04:37 2026