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structure nameCRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA- BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT
(ORPHAN NUCLEAR RECEPTOR NR1D1)
referenceRastinejad et al.
sourceHomo sapiens
experimentX-ray (resolution=2.40, R-factor=0.236)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyZinc finger, C4 type two domains;
multimeric complexes1a6y_AB 1ga5_AB 1ga5_EF 1hlz_AB
reference complex1a6y_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHEKRRF

Estimated binding specificities ?

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# IC=6.091 IC/col=0.677 n_of_columns=9 specificity:   
A |  12   0  57   7   0  12  24  24  12
C |   6   0  27  89  96   0  24  24   0
G |   8  96   6   0   0   6  24  24   8
T |  70   0   6   0   0  78  24  24  76
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updated Sun Jun 28 03:34:02 2026