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structure nameCRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA- BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT
(ORPHAN NUCLEAR RECEPTOR NR1D1)
referenceRastinejad et al.
sourceHomo sapiens
experimentX-ray (resolution=2.40, R-factor=0.236)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyZinc finger, C4 type two domains;
multimeric complexes1a6y_AB 1ga5_AB 1ga5_EF 1hlz_AB
reference complex1a6y_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHEKRRF

Estimated binding specificities ?

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# IC=6.207 IC/col=0.690 n_of_columns=9 specificity:   
A |  75  24  24  68   0   0   6   0  82
C |   9  24  24   6   0   0   6  96   6
G |   6  24  24  13  96  89  13   0   8
T |   6  24  24   9   0   7  71   0   0
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updated Thu Jan 8 17:58:35 2026