| structure name | YEAST MATALPHA2/MCM1/DNA TERNARY TRANSCRIPTION COMPLEX CRYSTAL STRUCTURE (PROTEIN MAT ALPHA-2 TRANSCRIPTIONAL REPRESSOR) |
| reference | Richmond et al. |
| source | SACCHAROMYCES CEREVISIAE |
| experiment | X-ray (resolution=2.25, R-factor=0.240) |
| structural superfamily | Homeodomain-like; |
| sequence family | Homeobox domain; |
| multimeric complexes | 1mnm_ABCD |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RRNSNR |
Estimated binding specificities ?
| readout + contact |  |
A | 6 6 0 89 0 75 68 C | 0 9 0 0 96 9 9 G | 8 6 0 0 0 6 6 T | 82 75 96 7 0 6 13scan! |
Dendrogram of similar interfaces ?
matrix format----RT------------------NT--NA--RG L +-----------------------------1b8i_B +-5 RT--RT----------------KTIAQCNA---- L ! +-----------------------------1ig7_A ! RC--RT------------------ITQCNAACRG L +-6 +6a8r_A ! ! +---------------------2 --RCRT------------------NT--NAITRG ! ! ! +5zjt_B ! +------4 ----RA------------------ITQTNAMG-- L +-7 ! +5zjt_E ! ! +----------------------1 ----RT------------------NT--NAIARG L ! ! +1b72_B +-8 ! ----RA----------------KGSAQA------ L ! ! +-----------------------------6j5b_C +-9 ! ------------------------NCITNARGRG L ! ! +-----------------------------6fqq_E +-10 ! ----RT------------------IAKGNA---- L ! ! +-----------------------------2hdd_A +-11 ! ------------------------IA--NA---- ! ! +-----------------------------4qtr_D ! ! ----RT------------RTQT--ITQANAVTKT L +-12 +-----------------------------2ld5_A ! ! --------QGCGTA--LC---------------- ! ! +-------------1orn_A -13 +---------------3 ------NGRGTG----LGLCRG------------ ! +-------------4e9f_A ! ----RA--------YA--------IAQCNAYCKG L +-----------------------------5flv_I |
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updated Tue Dec 19 05:55:28 2023