interface graph thumbnail
legend  pdf

structure nameADENINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
(DNA POLYMERASE I)
referenceJohnson et al.
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.70, R-factor=0.203)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNRFYINQH

Estimated binding specificities ?

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# IC=2.635 IC/col=0.659 n_of_columns=4 specificity:   
A |   9   9  67  96
C |  11  67  11   0
G |  67   9   9   0
T |   9  11   9   0
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updated Thu Sep 12 15:00:27 2024