interface graph thumbnail
legend  pdf

structure nameGUANINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITE
(DNA POLYMERASE I)
referenceJohnson et al.
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.90, R-factor=0.221)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTYRNNYQH

Estimated binding specificities ?

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# IC=2.753 IC/col=0.688 n_of_columns=4 specificity:   
A |  69   9   9   0
C |   9   9   9  96
G |   9   9  69   0
T |   9  69   9   0
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updated Mon Dec 16 18:15:42 2024