interface graph thumbnail
legend  pdf

structure name8OXOGUANINE AT THE PRE-INSERTION SITE OF THE POLYMERASE ACTIVE SITE
(DNA polymerase I)
referenceBeese et al.
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=2.01, R-factor=0.194)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRNNREYNQH

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |  16  13   0   0
C |  54  13  96   0
G |  13  16   0  96
T |  13  54   0   0
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updated Mon Dec 16 18:58:26 2024