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legend  pdf

structure name8OXOGUANINE AT THE PRE-INSERTION SITE OF THE POLYMERASE ACTIVE SITE
(DNA polymerase I)
referenceBeese et al.
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=2.01, R-factor=0.194)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRNNREYNQH

Estimated binding specificities ?

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# IC=3.848 IC/col=0.770 n_of_columns=5 specificity:   
A |   0   8  64   8   8
C |  88   0  16   8   8
G |   8  88   8  80   8
T |   0   0   8   0  72
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updated Sun Jun 28 04:54:06 2026