interface graph thumbnail
legend  pdf

structure nameAMINOFLUORENE DNA ADDUCT AT THE PRE-INSERTION SITE OF A DNA POLYMERASE
(DNA polymerase I)
referenceBecherel et al.
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=2.10, R-factor=0.211)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTYRNNREYNQH

Estimated binding specificities ?

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# IC=4.007 IC/col=0.501 n_of_columns=8 specificity:   
A |   0  96   9  11  24  24  24   9
C |  96   0  67  67  24  24  24  69
G |   0   0   9   9  24  24  24   9
T |   0   0  11   9  24  24  24   9
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updated Sun Jun 28 04:55:48 2026