interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF THE DNA BINDING DOMAINS OF NFAT AND FOXP2 BOUND SPECIFICALLY TO DNA.
(NUCLEAR FACTOR OF ACTIVATED T-CELLS, CYTOPLASMIC...)
referenceStroud et al. 'Cell(Cambridge,Mass.)' 126 375 2006
sourceHOMO SAPIENS
experimentX-ray (resolution=2.70, R-factor=0.238)
structural superfamilyp53-like transcription factors;E set domains;
sequence familyRel homology domain RHD; IPT/TIG domain;
multimeric complexes1a02_FJN 1p7h_LN 1pzu_BHIM 1s9k_CDE 2o93_LMO
reference complex3qrf_G
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRYTERQR

Estimated binding specificities ?

readout + contactlogo
# IC=6.288 IC/col=0.898 n_of_columns=7 specificity:   
A |   7  14  14   0   0   0   7
C |   9   9   7   0  96  96   0
G |   7  14   2   0   0   0   8
T |  73  59  73  96   0   0  81
scan!

home
updated Sat Aug 2 02:22:54 2025