interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNA
(PROTEIN DNA POLYMERASE I)
referenceKiefer et al.
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.80, R-factor=0.241)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNRYNQH

Estimated binding specificities ?

readout + contactlogo
# IC=3.142 IC/col=0.786 n_of_columns=4 specificity:   
A |   0   0  57  16
C |   0  96  13  13
G |  96   0  13  13
T |   0   0  13  54
scan!

home
updated Mon Dec 16 19:22:33 2024