2ff0_A : 3D-footprint complex

structure name	SOLUTION STRUCTURE OF STEROIDOGENIC FACTOR 1 DNA BINDING DOMAIN BOUND TO ITS TARGET SEQUENCE IN THE INHIBIN ALPHA-SUBUNIT PROMOTER (STEROIDOGENIC FACTOR 1)
source	MUS MUSCULUS
experiment	NMR
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
sequence family	Zinc finger, C4 type two domains;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ff0_A interface=22,25,29,30,80,83, delcpvcgdkvsgyhyglltcEscKgffKRtvqnnkhytctesqsckidktqrkrcpfcrfqkcltvgmrleavradrmRggRnkfgpmykrdralkqqkka
interface signature	EKKRRR

Estimated binding specificities ?

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# IC=9.580 IC/col=1.064 n_of_columns=9

specificity:

A |   0   0  12   0   0   0  12   0  96
C |   0   0  12  96  96  96  12   0   0
G |   0  84  60   0   0   0  12  96   0
T |  96  12  12   0   0   0  60   0   0

scan!

Dendrogram of similar interfaces ?

matrix format

  
  --EA--KG----KTRG--   L                            +4umm_A    
                                     +--------------1 
  ------KGVG----RG--   L             !              +4tnt_B    
                             +-------4 
  ----EC--KGAG--KTRG   L     !       !              +4aa6_B    
                           +-6       +--------------2 
  ------KGVT----RG--   L   ! !                      +5emc_A    
                           ! ! 
  --EC--KGAG--KGRG--   L   ! +----------------------1hcq_E    
                         --7 
  CAEC--KG----KGRG--   L   !                   +----1cit_A    
                           !      +------------3 
  ------KGVT----RG--   L   +------5            +----2c7a_B    
                                  ! 
  --EC--KGAG----RG--   L          +-----------------4ond_A

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updated Mon Jun 29 15:02:20 2026