2ff0_A : 3D-footprint complex

structure name	SOLUTION STRUCTURE OF STEROIDOGENIC FACTOR 1 DNA BINDING DOMAIN BOUND TO ITS TARGET SEQUENCE IN THE INHIBIN ALPHA-SUBUNIT PROMOTER (STEROIDOGENIC FACTOR 1)
source	MUS MUSCULUS
experiment	NMR
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
sequence family	Zinc finger, C4 type two domains;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ff0_A interface=22,25,29,30,80,83, delcpvcgdkvsgyhyglltcEscKgffKRtvqnnkhytctesqsckidktqrkrcpfcrfqkcltvgmrleavradrmRggRnkfgpmykrdralkqqkka
interface signature	EKKRRR

Estimated binding specificities ?

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# IC=9.580 IC/col=1.064 n_of_columns=9

specificity:

A |   0   0  12   0   0   0  12   0  96
C |   0   0  12  96  96  96  12   0   0
G |   0  84  60   0   0   0  12  96   0
T |  96  12  12   0   0   0  60   0   0

scan!

Dendrogram of similar interfaces ?

matrix format

  
  --EA--KG----KTRG--   L     +-----------------------------4umm_A    
                             ! 
  CAEC--KG----KGRG--   L     !                        +----1cit_A    
                           +-4           +------------1 
  ------KGVT----RG--   L   ! !       +---2            +----2c7a_B    
                           ! !       !   ! 
  --EC--KGAG----RG--   L --5 +-------3   +-----------------4ond_A    
                           !         ! 
  ----EC--KGAG--KTRG   L   !         +---------------------4aa6_B    
                           ! 
  --EC--KGAG--KGRG--   L   +-----------------------------1hcq_E

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updated Sat Jan 10 05:12:39 2026