interface graph thumbnail
legend  pdf

structure nameO6-METHYL:C PAIR IN THE POLYMERASE-10 BASEPAIR POSITION
(DNA polymerase I)
referenceForsberg et al. Proc.Natl.Acad.Sci.Usa 103 19701 2006
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.80, R-factor=?)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTYRNNFYQH

Estimated binding specificities ?

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# IC=2.674 IC/col=0.669 n_of_columns=4 specificity:   
A |   0   9  11   9
C |  96  67   9   9
G |   0  11   9  69
T |   0   9  67   9
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updated Thu Sep 12 16:09:11 2024