2hhw_D : 3D-footprint complex

structure name	DDTTP:O6-METHYL-GUANINE PAIR IN THE POLYMERASE ACTIVE SITE, IN THE CLOSED CONFORMATION (DNA Polymerase I)
reference	Forsberg et al. Proc.Natl.Acad.Sci.Usa 103 19701 2006
source	Geobacillus stearothermophilus
experiment	X-ray (resolution=1.88, R-factor=?)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
sequence family	DNA polymerase family A;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2hhw_D interface=286,319,326,329,333,501,533, akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak
interface signature	KRNNRQH

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# IC=2.409 IC/col=0.344 n_of_columns=7

A |   8  24  24  72   8  24   8
C |  72  24  24   8  72  24  80
G |   8  24  24   8   8  24   0
T |   8  24  24   8   8  24   8

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updated Mon Dec 16 19:38:13 2024