interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A TWO-DOMAIN IDER-DNA COMPLEX CRYSTAL FORM II
(Iron-dependent repressor ideR)
referenceWisedchaisri et al. Biochemistry 46 436 2007
sourceMycobacterium tuberculosis
experimentX-ray (resolution=2.60, R-factor=0.229)
structural superfamilyIron-dependent repressor protein, dimerization domain;"Winged helix" DNA-binding domain;
sequence familyIron dependent repressor, metal bindin; Iron dependent repressor, Nterminal D; MarR family;
multimeric complexes2isz_ABCD 2it0_ABCD
reference complex2isz_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSPTSR

Estimated binding specificities ?

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# IC=3.536 IC/col=0.707 n_of_columns=5 specificity:   
A |   6  16   5   0  54
C |   5   5  85   0  16
G |   5  54   0   0  21
T |  80  21   6  96   5
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updated Mon Dec 16 19:43:24 2024