interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF NFAT BOUND TO THE HIV-1 LTR TANDEM KAPPAB ENHANCER ELEMENT
(actor of activated T-cells, cytoplasmic 2)
referenceBates et al. Structure 16 684 2008
sourceHomo sapiens
experimentX-ray (resolution=3.05, R-factor=0.225)
structural superfamilyp53-like transcription factors;E set domains;
sequence familyRel homology domain RHD; IPT/TIG domain;
multimeric complexes1a02_FJN 1p7h_LN 1pzu_BHIM 1s9k_CDE 2o93_LMO
reference complex1p7h_L
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRYTERQR

Estimated binding specificities ?

contactlogo
# IC=3.263 IC/col=0.816 n_of_columns=4 specificity:   
A |   3   1  89  44
C |   4   0   3  18
G |  84  95   1  17
T |   5   0   3  17
scan!

home
updated Mon Dec 16 19:56:41 2024