2xy5_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF AN ARTIFICIAL SALEN-COPPER BASEPAIR IN COMPLEX WITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS (DNA POLYMERASE I)
reference	Schneider et al. 'Nature 3 794 2011
source	GEOBACILLUS STEAROTHERMOPHILUS
experiment	X-ray (resolution=2.22, R-factor=0.195)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
sequence family	DNA polymerase family A;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2xy5_A interface=287,292,320,327,330,419,502,534, aakmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkksktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak
interface signature	KYRNNYQH

readout + contact

# IC=3.940 IC/col=0.563 n_of_columns=7

A |  96  24   8   8  24  24   8
C |   0   8   0   0  24  24  24
G |   0  48  88  88  24  24  56
T |   0  16   0   0  24  24   8

home
updated Mon Dec 16 20:14:15 2024