interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A SALICYLIC ALDEHYDE BASE IN THE PRE-INSERTION SITE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS
(DNA POLYMERASE I)
referenceSchneider et al. 'Nature 3 794 2011
sourceGEOBACILLUS STEAROTHERMOPHILUS
experimentX-ray (resolution=3.05, R-factor=0.239)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNRYQ

Estimated binding specificities ?

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# IC=4.007 IC/col=0.801 n_of_columns=5 specificity:   
A |   0   0  67   9   9
C |  96   0   9   9   9
G |   0  96  11  67   9
T |   0   0   9  11  69
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updated Sat Aug 2 03:14:45 2025