interface graph thumbnail
legend  pdf

structure nameCOCRYSTAL STRUCTURE OF BACILLUS FRAGMENT DNA POLYMERASE I WITH DUPLEX DNA , DCTP, AND ZINC (CLOSED FORM).
(DNA polymerase I)
referenceGolosov et al. Structure 18 83 2010
sourceBacillus stearothermophilus
experimentX-ray (resolution=1.90, R-factor=0.212)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRNNREAYINNQH

Estimated binding specificities ?

readout + contactlogo
# IC=4.253 IC/col=0.851 n_of_columns=5 specificity:   
A |   0   0  24  48  12
C |   0  96   0  12   0
G |   0   0  72  24  72
T |  96   0   0  12  12
scan!

home
updated Thu Jan 8 21:29:44 2026