structure name | GR GAMMA DNA-BINDING DOMAIN:FKBP5 16BP COMPLEX-34 (Glucocorticoid receptor) |
reference | Yamamoto et al. Science 324 407 2009 |
source | Rattus norvegicus |
experiment | X-ray (resolution=1.90, R-factor=0.181) |
structural superfamily | Glucocorticoid receptor-like DNA-binding domain; |
sequence family | Zinc finger, C4 type two domains; |
multimeric complexes | 3g6t_AB |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | KVR |
Estimated binding specificities ?
contact |
A | 0 0 13 24 13 C | 0 0 16 24 57 G | 0 96 13 24 13 T | 96 0 54 24 13scan! |
Related DNA sequences reported in the literature ?
site | source | matches (E-value) |
---|---|---|
term: GR | ||
TGTTCT | PubMed | 3g6t_A(3.59e-04) |
Dendrogram of similar interfaces ?
matrix format--EC----RGRG--RT +8hbm_B +--------------1 ----KGVG----RG-- L +-----2 +5cbx_B ! ! --DAKG--RGRG---- L +-3 +--------------4iqr_B ! ! CAECKG--KGRG---- L --4 +--------------------6l6q_B ! CAECKG--KGRG---- L +----------------------7wnh_D |
home
updated Fri Sep 13 17:01:38 2024