3jtg_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF MOUSE ELF3 C-TERMINAL DNA-BINDING DOMAIN IN COMPLEX WITH TYPE II TGF-BETA RECEPTOR PROMOTER DNA (ETS-related transcription factor Elf-3)
reference	Babayeva et al.
source	Mus musculus
experiment	X-ray (resolution=2.20, R-factor=0.234)
structural superfamily	"Winged helix" DNA-binding domain;
sequence family	Etsdomain;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3jtg_A interface=56,57,60,61,63,64,78, gthlwefirdilihpelneglmkwenrhegvfkflrseavaqlwgqkkknsnmtyEKlsRAmRYyykreilervdgrRlvykfgknssgwkeeev
interface signature	EKRARYR

Estimated binding specificities ?

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# IC=6.829 IC/col=0.759 n_of_columns=9

specificity:

A |   0   0   0   0   0   5  24  11  11
C |  12   0  96  96   6  19  24  12  11
G |  11   0   0   0   0  56  24  11   7
T |  73  96   0   0  90  16  24  62  67

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Related DNA sequences reported in the literature ?

site	source	matches (E-value)
term: ELF3
AAGCAGGAAGTT	PubMed	3jtg_A(4.96e-10)

Dendrogram of similar interfaces ?

matrix format

  
  QCKT--RGAT--RGNT------   L     +-----------------------------8smh_F    
                               +-2 
  DCKT--RG----RGYA----KA   L   ! !                            +5jvt_A    
                             --3 +----------------------------1 
  DCKT--RGST--RGYA------   L   !                              +4bnc_A    
                               ! 
  ----NAST--RGHT--STFT--   L   +-----------------------------1vtn_C

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updated Sat Jan 10 06:10:16 2026