| structure name | CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF TRANSCRIPTION FACTOR FLI1 IN COMPLEX WITH AN 11-MER DNA GACCGGAAGTG (Friend leukemia integration 1 transcription factor) |
| reference | Tsodikov et al. 'Nucleic 44 8990 2016 |
| source | Homo sapiens |
| experiment | X-ray (resolution=3.10, R-factor=0.196) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Etsdomain; |
| multimeric complexes | 5jvt_AD 6vg8_AD 6vgd_AD |
| redundant complexes |  5e8i_A
6vg2_D
6vg8
6vgd
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | DKRRYK |
Estimated binding specificities ?
| readout + contact |  |
A | 19 0 0 96 38 C | 76 0 0 0 19 G | 1 96 96 0 20 T | 0 0 0 0 19scan! |
Dendrogram of similar interfaces ?
matrix format------------DCKT--RG--RGYA----KA L +5jvt_A +--------------1 ------------DCKT--RGATRCYA------ L +----2 +5e8i_D ! ! ------------DCKT--RGSTRGYA------ L +--3 +---------------4bnc_A ! ! --------------KT--RG--RAYA------ L +-4 +--------------------6vge_A ! ! ------------DCKT--RG--RGYA------ L +-5 +-----------------------1dux_F ! ! ------------ECKT--RGATRGNT------ L +-6 +------------------------1pue_E ! ! --------------KT--RG--RGYA------ L +-7 +-------------------------3wts_C ! ! --------------KT--RG--RGYA------ L +-8 +--------------------------4lg0_B ! ! ------------------TT--CT--NGKG-- L +-9 +---------------------------7oot_B ! ! ----RC-------------------------- +-10 +---------------------------7cow_T ! ! NC----------------TT--CT--NGKG-- L +-11 +---------------------------7rh2_B ! ! ------LTNTHG--RTYTPT------------ L +-12 +----------------------------6qil_A ! ! --------------------NTCT--NGST-- L -13 +----------------------------1if1_B ! --RC---------------------------- +----------------------------6l9z_S |
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updated Sat Jan 10 08:24:09 2026