structure name | RNA POLYMERASE ALPHA C-TERMINAL DOMAIN (E. COLI) AND SIGMA REGION 4 (T. AQ. MUTANT) BOUND TO (UP,-35 ELEMENT) DNA (RNA POLYMERASE SIGMA FACTOR) |
reference | Lara-Gonzalez et al. Biochemistry 59 4523 2020 |
source | THERMUS AQUATICUS |
experiment | X-ray (resolution=3.25, R-factor=0.257) |
structural superfamily | Sigma3 and sigma4 domains of RNA polymerase sigma factors; |
sequence family | Sigma70, region 4; |
multimeric complexes | 3n97_ABC |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | LETRERRQ |
Estimated binding specificities ?
contact |
A | 0 0 78 85 4 C | 0 96 6 5 4 G | 0 0 6 3 81 T | 96 0 6 3 7scan! |
Dendrogram of similar interfaces ?
matrix format----RCEC----QT +-----------------------------6wmr_Z +-1 LTTTRGECRCRTQC L +-2 +-----------------------------4xln_F ! ! --TT--PTTCSTNT L +-3 +-----------------------------4lln_I ! ! --STRGQTQAST-- L --4 +-----------------------------7t8k_B ! --HCRGRGQAQGKG L +-----------------------------2glo_A |
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updated Tue Dec 19 07:55:43 2023